Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTCAYRREIHHAHVAIRDWLAGDSRADALDALMARFAEDFSMVTPH--GVVLDKTALGELFRSKGGTRPGLRIEIDGESLLASGVDGATLAYREIQSDAAGRSERLSTVVLHRDDEGRLYWRHLQETFCG
3ECF Chain:A ((6-102))
----------KYHEILKKYFLSFET-GDFSQVQ--FSCNLEFLSPISGNTLKGTEEVIPFLKGVTTRVAEV--NIMSTT---VEYPRASGVWQMRTTK-GT--LYTLHNFFRLD-EEGIVYVWPMFDPKA
General information:
TITO was launched using:
RESULT:
Template:
3ECF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -22328 for 633 contacts (-35.3/contact) +
2D Compatibility (PS) -9694 + (NN) -393 + (LL) 2432
1D Compatibility (HY) -4800 + (ID) 350
Total energy: -35133.0 ( -55.50 by residue)
QMean score : 0.274
(partial model without unconserved sides chains):
PDB file :
Tito_3ECF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ECF-query.scw
PDB file :
Tito_Scwrl_3ECF.pdb
: