Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MARKNAVKDNLEQIQHQSYSELQELLSEANSMLADSAAFAGDKADSARARIGALLEKANDALGKGGSAVAERSRHAVDATESYIGANPWQTVAITTAVGLLAGFL--LGRRS
2GRG Chain:A ((1-98))
------MKSSIPITEVLPRAVGSLTFDENYNLLDTS----GVAKVIEKSPIAEIIRKSNAELGRLGYSVYEDAQYIGHAFKK----AGHFIVYFTPKNKNREGVVPPVGITN
General information:
TITO was launched using:
RESULT:
Template:
2GRG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 12698 for 685 contacts (18.5/contact) +
2D Compatibility (PS) -10104 + (NN) -1490 + (LL) 1412
1D Compatibility (HY) -2400 + (ID) 900
Total energy: -784.0 ( -1.14 by residue)
QMean score : 0.015
(partial model without unconserved sides chains):
PDB file :
Tito_2GRG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2GRG-query.scw
PDB file :
Tito_Scwrl_2GRG.pdb
: