Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSKPTVRVLALLELLQSHGQLSG------SELARRLEVDGRTLRRYIVALEELGIPISAERGRHGGYRLVAGFKLPPLMFSAEETLAVSLGLLAVRSLGLGESELALESAQAKLSRVMPVALRRRLVALRETASLDLARARAGTSVAALATLAEAAQVRARVEFRYRDPQGAETLRQLDPYGLAYRNGCWYVSGFCHLRQALRSFRLDRLDAPRMLAERFERPADFDTLRHLRESFARMPRAYPVEILMRAAREQVVAVLGEPLGLLAEVDGGTLLRASTDDLDWFARRLCGLPFDFEVRQPLELREPLRRQAERVLRNLGQEEASDHR |
1E2X Chain:A ((10-231)) | QSPAGFAEEYIIESIWNNRFPPGTILPAERELSELIGVTRTTLREVLQRLARDGW---------------------------------------LTIQHGKPTKVNNFWETSGLNILETLARLDHESVPQLIDNLLSVRTNISTIFIRTAFRQHPDKAQEVLATANEVADH------------------------------ADAFAELDYNIFRGLAFASGNPIYGLILNGMKGLYTRIGRHYFAN---PEARSLALGFYHKLSALCSE------------------------------GAHDQVYETVRRYGHESGEIWHRMQ----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1E2X.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -35699 for 1609 contacts (-22.2/contact) +
2D Compatibility (PS) -23941 + (NN) -15304 + (LL) 6792
1D Compatibility (HY) -1600 + (ID) 1700
Total energy: -71452.0 ( -44.41 by residue)
QMean score : 0.404
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