Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLAQFTPSALADLANCVLRIPLALQQPSSVAMTLPSLTS-FMPHFGAPALLL--LQLLAALPATAAETDATPLRFSVM--ESWSMP------LVRLQRGQPIDGIVY---DITRSLARQVGRKALYHPYPRG-----RIEQAMNAGEIDVRCYISP---AWLSHDFPGYRWSVALLVQRD----ILVAREGFAPIPEALPAQRIGTVL-----GYSYP--RLQALFDIGRLRRDDARTQDLVLEKLRAG------RYRYAVSHQLSLHWSNRQAPGQ---------PPLQEAAQLEETAVS----CMVRDSAEVPVEAILKTFEEMKRSGEIEEILQRYR- |
| 1S4P Chain:A ((10-348)) | KTTMDYITPSFGKPKACYVTLVRNKELKGLLSSIKYVENKINKKFPYPWVFLNDEPFTEEFKEAVTKAVSSEVKFGILPKEHWSYPEWINQTKAAEIRADAATKYIYGGSESYRHMCRYQSGFFWRHELLEEYDWYWRVEP-----DIKLYCDINYDVFKWMQENEKVYGFTVSIHEYEVTIPTLWQTSMDFIKKNPEYLDENNLMSFLSNDNGKTYNLCHFWSNFEIANLNLWRSPAYREYFDTLDHQGGFFYERWGDAPVHSIAAALFLPKDKIHYFSDIGYHHPPYDNCPLDKEVYNSNNCECDQGNDFTFQGYSCGKEYYDAQGL-VKPKNWKKFRE |
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General information:
TITO was launched using:
| RESULT:
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Template: 1S4P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -70563 for 2067 contacts (-34.1/contact) +
2D Compatibility (PS) -29216 + (NN) -7430 + (LL) 72
1D Compatibility (HY) -6800 + (ID) 1900
Total energy: -115837.0 ( -56.04 by residue)
QMean score : 0.102
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