Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKLLAGSFAALFL--------SLSAQAADCTFTQLEIVPQFGSPNMFGGEDEH--------VRVMFSNEDPNDDNPDAFPEPPVYLADR-DSGNDCRIEDGGIWSRGGVFLSQDGRRVLMHEFSGSSAELVSYDSATCKVVHREDISGQRWAVDKDGLRLGQKCSGESVDSCAKIVKRSLAPFCQTAKK |
1Y88 Chain:A ((16-199)) | NLYFQGHMVARLLEEHGFETKTNVIVQGNCVEQEIDVVAERDGERYMIECKFHNIPVYTGLKEAMYTYARFLDVEKHGFTQPWIFTNTKFSEEAKKYAGCVGIKLTGWSYPEKEGIEVLLESKGLYPITILRIDKEVLDELVRAGLVFCRDVVSAGEEKLREI--GLSAKKAREVIAEAKKVIGGS--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1Y88.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 16172 for 1247 contacts (13.0/contact) +
2D Compatibility (PS) -17486 + (NN) -3266 + (LL) 300
1D Compatibility (HY) -4400 + (ID) 1150
Total energy: -9830.0 ( -7.88 by residue)
QMean score : 0.070
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