Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTRAINDPGNEDPGSLL--ETDADALLGGAAAQAPEERCRLAAQACIRACERYLALCTESSREQRQHAGDCADLCRLAALLLER-----------RSPWAPAACELAARYALACAERCDGDEPLERECAG-----ACRRFVEACRPLLPA-
1RLH Chain:A ((5-155))
HHHHHHSSGLVPRGSHMVIPAEANIIVGYSHFIKTVEDLNEIIRTHVPGSKYGIGFSEASGDRLIRYDGNDDDLVKACIENIRRISAGHTFVILIRNAYPINILNAVKMCQEVGSIFAATANPLQIIVYKGERGNGVLGVIDGYSPVGVES
General information:
TITO was launched using:
RESULT:
Template:
1RLH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -26438 for 865 contacts (-30.6/contact) +
2D Compatibility (PS) -13933 + (NN) -8839 + (LL) 0
1D Compatibility (HY) -1200 + (ID) 750
Total energy: -51160.0 ( -59.14 by residue)
QMean score : 0.258
(partial model without unconserved sides chains):
PDB file :
Tito_1RLH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1RLH-query.scw
PDB file :
Tito_Scwrl_1RLH.pdb
: