Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNAYLSDQPVRLSPLRDEQGNQPRFGLLLEPGRPGMHVGELPAQWLKGLARSHHLLLLRGFAAFADAESLTRYCHDFGEVMLWPF----GAVLELVEQEGAEDHIFANNYVPLHWDGMYLETVPEFQVFHCVDAPGDSDGGRTTFSSTPAALQLADSSELEL---------WRRASGRYQRSAAHYSSRSAAPIVERHPRREFPILRFCEPPVEGDASFINPS-EFHYDGIAPEQRGELLASLRRCLYHPQAHYAHRWRSDDLVIADNLTLLHGREAFAHRAPRHLRRVHIHAEPALRNPHLQRD |
| 1GY9 Chain:A ((4-282)) | --------RLSITPL------GPYIGAQISGADLTRPLSDNQFEQLYHAVLRHQVVFLRDQAI--TPQQQRALAQRFGELHIHPVYPHAEGVDEIIVLDTHNDNPPDND--NWHTDVTFIETPPAGAILAAKELP--STGGDTLWTSGIAAYEALSVPFRQLLSGLRAEHDFRKSFPEYKYRKTEEEHQRWREAVAKNPPLLHPVVRTH-PVSGKQALFVNEGFTTRIVDVSEKESEALLSFLFAHITKPEFQVRWRWQPNDIAIWDNRVTQHYANADYLPQRRIMHRATILGDKPFYRA----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1GY9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -127350 for 2111 contacts (-60.3/contact) +
2D Compatibility (PS) -27752 + (NN) -6514 + (LL) 1332
1D Compatibility (HY) -4000 + (ID) 2800
Total energy: -167084.0 ( -79.15 by residue)
QMean score : 0.431
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