Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRIENRVFLVTGGSSGLGAATAKMLVEQGGKVVLADINAEAGAAKAAELGAQARFVRADIASEADGRQAVAAALEAFGGLHGLANCAGVAPAEKVLGRNGIHALESFRRVIDINLVGSFNMLRLAAEAMSQGQPDEGGERGVIVNTASVAAFDGQIGQAAYSASKSGVVGMTLPIARELARFGIRVMTIAPGIFETPMMAGMPQEVRDSLGASVPFPPRLGRPDEYAALVRQIIENSMLNGEVIRLDGAIRMAAR
4XGN Chain:C ((9-260))
MEIRDNVFLITGGASGLGAGTARLLTEAGGKVVLADLNQDAGEALARELGGV--FVRCDVAREEDAQAAVAAATK-LGTLRGLVNCAGIAPAAKTVGKDGPHPLELFAKTITVNLIGTFNMIRVAAAAMAANEPAPTGERGVIVSTASVAAFDGQIGQAAYAASKAGVAGMTLPIARDLSRNAIRVMTIAPGIFETPMLLGMPQEVQDALGAMVPFPPRLGKPAEYAMLVRQIFENPMLNGEVIRLDGAIRMQPK
General information:
TITO was launched using:
RESULT:
Template:
4XGN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -143166 for 2234 contacts (-64.1/contact) +
2D Compatibility (PS) -27718 + (NN) -10794 + (LL) 388
1D Compatibility (HY) -26400 + (ID) 8650
Total energy: -216340.0 ( -96.84 by residue)
QMean score : 0.600
(partial model without unconserved sides chains):
PDB file :
Tito_4XGN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4XGN-query.scw
PDB file :
Tito_Scwrl_4XGN.pdb
: