Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MELFKEFTFESAHRLPHVPEGHKCGRLHGHSFRVAIHIEGEVDPHTGWIRDFAEIKAIFKPIYEQLDHNYLNDIPGLENPTSENLCRWIWQQLKPLLPELSKVRVHETCTSGCEYRGD
4NTK Chain:D ((6-121))
--LFKDFTFEAAHRLPHVPEGHKAGRLHGHSFMVRLEITGEVDPHTGWIIDFAELKAAFKPTYERLDHHYLNDIPGLENPTSEVLAKWIWDQVKPVVPLLSAVMVKETCTAGCIYRGE
General information:
TITO was launched using:
RESULT:
Template:
4NTK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -74586 for 815 contacts (-91.5/contact) +
2D Compatibility (PS) -12559 + (NN) -7337 + (LL) 312
1D Compatibility (HY) -12800 + (ID) 4400
Total energy: -111370.0 ( -136.65 by residue)
QMean score : 0.444
(partial model without unconserved sides chains):
PDB file :
Tito_4NTK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4NTK-query.scw
PDB file :
Tito_Scwrl_4NTK.pdb
: