Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSRIFADNAQSIGNTPLVQINRIA--PR---GVTILAKIEGRNPGYSVKCRIGANMIWDAEASGRLKSGMTLVEPTSGNTGIGLAFVAAARGYKLILTMPASMSLERRKVLKALGAELVLTEPAKGMKGAIQKAEELVAGDPGKYFMPQQFDNPANPAIHEKTTGPEIWNDTEGAVDVLVSGVGTGGTLTGVSRYIKNTRGKPILAVAVEPVTSPVISQTLAGEEVKPAPHKIQGIGAGFVPKNLDLSLVDRVEKIGDDEAKNMALRLMQEEGILCGISSGAAMAAAVRLAEEPNMQGKTIVVILPDSGERYLSSMLFDGLFSEQELTQ
2PQM Chain:A ((12-319))--RIYHNILETIGGTPLVELHGVTEHPRIKKGTRILVKLEYFNPMSSVKDRVGFNIVYQAIKDGRLKPGMEIIESTSGNTGIALCQAGAVFGYRVNIAMPSTMSVERQMIMKAFGAELILTEGKKGMPGAIEEVNKMIKENPGKYFVANQFGNPDNTAAHHYTAN-EIWEDTDGEVDIVVSAVGTSGTVIGVAE-KLKEKKKGIKIIAVEPEESAVLEGKAKG------PHGIQGIGAGFIPDIYKKEFVDEIIPIKTQDAWKMARAVVKYDGIMCGMSSGAAILAGLKEAEKPENEGKTIVIIVPSCGERYLSTDLY-----------


General information:
TITO was launched using:
RESULT:

Template: 2PQM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -138742 for 2763 contacts (-50.2/contact) +
2D Compatibility (PS) -33727 + (NN) -14779 + (LL) 1308
1D Compatibility (HY) -26400 + (ID) 7300
Total energy: -219640.0 ( -79.49 by residue)
QMean score : 0.565

(partial model without unconserved sides chains):
PDB file : Tito_2PQM.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2PQM-query.scw
PDB file : Tito_Scwrl_2PQM.pdb: