Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MQIRADFDSGNIQVIDASDPRRIRLAIRPDLASQHFQWFHFKVEGMAPATEHCFTLVNAGQSAYSHAWSGYQAVASYDGERWFRVPSQYDADGLHFQLEPEESEVRFAYFEPYSRERHARLVERALG-IE-GVERLAVGTSVQGRDIELLRVRRHPDSHLKLWVIAQQHPGEHMAEWFMEGLIERLQRP--DDTEMQRLLEKADLYLVPNMNPDGAFHGN-----LR--------TNAAGQDLNRAWLE------------------PSAERSPEVWFVQQEMKRH--GVDLFLDIHGDEEI-PHVFAAGCEGNPGYTPRLERLEQRFREELMARGEFQIRHGYPRSAPG---QANLALACNFVGQTYDCLAFTIEMPFKDHDDNPEPGTGWSGARSKRLGQDVLSTLAVLVDELR |
1KWM Chain:A ((99-398)) | ----------------------------------------------------------------------------------------------------------HSYEKYNKWETIEAWTQQVATENPALISRSVIGTTFEGRAIYLLKVGKAGQNKPAIFMDCGFHAREWISPAFCQWFVREAVRTYGREIQVTELLNKLDFYVLPVLNIDGYIYTWTKSRFWRKTRSTHTGSSCIGTDPNRNFDAGWCEIGASRNPCDETYCGPAAESEKETKALADFIRNKLSSIKAYLTIHSYSQMMIYPYSYAYKLGEN-NAELNALAKATVKELASLH----GTKYTYGPGATTIYPAAGGSDDWAYDQGIRYSFTFELRDTG-----RYGFLLPESQIRATCEETFLAIKYVASYVL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1KWM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -110483 for 2184 contacts (-50.6/contact) +
2D Compatibility (PS) -28026 + (NN) -12483 + (LL) 7460
1D Compatibility (HY) -8800 + (ID) 2250
Total energy: -154582.0 ( -70.78 by residue)
QMean score : 0.492
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