Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-MTFNRVVCGKLS-WFIQAGGSMPSLIMDIALSGER--------LQAIYGGRANRVLLRSRDGRRVNLPAHHLRPFIGHD----GVHGTFRLDFSEDGRLLALQRLA--
3U4E Chain:G ((1-122))
MTTFKLAACVTLRCTNATINGSLTEEVKNCSFNITTELRDKKQKAYALFYRPSEYILINCQTTTTEAVDAATAAKVFKQYANDNGIDGEWTYD-DATKTFTVTEGLEVL
General information:
TITO was launched using:
RESULT:
Template:
3U4E.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -32702 for 544 contacts (-60.1/contact) +
2D Compatibility (PS) -9406 + (NN) 355 + (LL) 132
1D Compatibility (HY) -2800 + (ID) 650
Total energy: -45071.0 ( -82.85 by residue)
QMean score : 0.057
(partial model without unconserved sides chains):
PDB file :
Tito_3U4E.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3U4E-query.scw
PDB file :
Tito_Scwrl_3U4E.pdb
: