Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEPFRNIGIIGRLGSTQVLDTIRRLKKFLIDRHLHVILEDTIAEVLPGHGLQTCSRKIMGEICDLVVVVGGDGSMLGAARALARHKVPVLGINRGSLGFLTDIRPDELEAKVGEVLDGQYIVESRFLLDAQVRRGIDSMGQGDALNDVVLHPGKSTRMIEFELYIDGQFVCSQKADGLIVATPTGSTAYALSAGGPIMHPKLDAIVIVPMYPHMLSSRPIVVDGNSELKIVVSPNMQIYPQVSCDGQNHFTCAPGDTVTISKKPQKLRLIHPIDHNYYEICRTKLGWGSRLGGGD |
| 1SUW Chain:C ((38-212)) | ------------------------------------------------------------ENFDFIVSVGGDGTILRILQKLKRCP-PIFGINTGRVGLLTHASPENFEVELKKAVE-------KFEVERFPRVSCSAMPDVLALNEIAVLSRKPAKMIDVALRVDGVEVDRIRCDGFIVATQIGSTGYAFSAGGPVVEPYLECFILIPIAPFRFGWKPYVVSMERKIEVIAEKAI-----VVADGQK----------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1SUW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -98560 for 1305 contacts (-75.5/contact) +
2D Compatibility (PS) -19528 + (NN) -9152 + (LL) 7348
1D Compatibility (HY) -15200 + (ID) 3050
Total energy: -138142.0 ( -105.86 by residue)
QMean score : 0.387
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