Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTLLTELLDELRHPAVRDLAWTLLAPPLLRRTPEPQ----RHPLAASRWRQEPERLAAWLREQERQPQHLAAWLAQWPRQRLGLYYEHLWQFALEQAPDVRLIAANLPVRDGGHTLGELDLLLRDDDGIHHLELAIKLYLGPQSGPGDWLGP-GGQDRLSRKLEHLCRHQLPLAATREGRQVLAAHGAESAVSALW-LSGYLFHPW---PGPGSLPADIEPRHLRGRWLRQRDWPAYLASLAGPQTGQHW------LHLSREHWLAPAMRRQDPLDPPRDGACWN---------IAFADEARPQMLV-----------RVVPRDGYWVEAERLFLAS-DDW-----PPGLSLWGSARQAADA--------- |
| 4USR Chain:A ((1-357)) | GPAMPPILDVI---VIGGGQAALTTAYFLRRTSLSYLLLDEQPGPGGAWLHAWDSLRLFSPAAWSS---IAGWPMPSPTEPGNPTRNDVIDYLRRYEDRYQFPIQRPVRVDTVTRLDDLWRVQAGD--QQWLARAVISATGTWSKP--FIPPYEGRELFQGAQIHSAHYRTP--APFAGKRVMVVGGGNSGAQVLAELSSVSETLWITQEPPAFLPDEVDGRVLFERATARWKAQQEGRSIDEPAGGFGDIVMVPPVREARERGVLVAERPFARFTE--TGVEWADGRRENLDAVIWCSGFRPALDHLRELGVVEADGKVQVEDTRVVKQPNLWLVGYGDWTGMASATLIGVTRTARSTADQVVQALTATP |
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General information:
TITO was launched using:
| RESULT:
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Template: 4USR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -60465 for 2280 contacts (-26.5/contact) +
2D Compatibility (PS) -31984 + (NN) -12753 + (LL) -188
1D Compatibility (HY) -2000 + (ID) 3150
Total energy: -110540.0 ( -48.48 by residue)
QMean score : 0.115
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