Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSRVLVIESSARQRGSVSRLLTAEFISHWKIAHPADRFQVRDLAREPLPHLDELLLGAWTTPC-DGHSAAERRALERSNRLTEELRMADVLVLAAPMYNFAIPSSLKSWFDHVLRAGLTFRY-AEQGPEGLLQGKRAFVLTARGGIYA-----GGGLDHQEPYLRQVLGFVGIHDVTFIHAEGMNMGPEFREKGLARARERMRQALETDTSLCVPLPTLR
3R6W Chain:B ((2-205))
-SRILAVHASPRGERSQSRRLAEVFLAAYREAHPQARVARREVGRVPLPAVTEAFVAAAFHPQPEQRSLAMQADLALSDQLVGELFDSDLLVISTPMYNFSVPSGLKAWIDQIVRLGVTFDFVAQYRP--LLRGKRALIVTSRGGHGFGPGGENQAMNHADPWLRTALGFIGIDEVTVVAAEGE--------DSCDEAEQRL------------------
General information:
TITO was launched using:
RESULT:
Template:
3R6W.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -106221 for 1437 contacts (-73.9/contact) +
2D Compatibility (PS) -19878 + (NN) -6870 + (LL) 1688
1D Compatibility (HY) -14400 + (ID) 3750
Total energy: -149431.0 ( -103.99 by residue)
QMean score : 0.538
(partial model without unconserved sides chains):
PDB file :
Tito_3R6W.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3R6W-query.scw
PDB file :
Tito_Scwrl_3R6W.pdb
: