Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGSHQERPLIGLLFSETGVTAD-IERSQRYGALLAVEQLNREGGVGGRPIETLSQDPGGDPDRYRLCAEDFIRNRGVRFLVGCYMSHTRKAVMPVVERADALLCYPTPYEG-F---EYSPNIVYGGPAPNQNSAPLAAYLIRHYGERVVFIGSDYIYPRESNHVMRHLYRQHGGTVLEEIYIPLYPSDDDVQRAVERIYQARADVVFSTVVGTGTAELYRAIARRYGDGRRPPIASLTTS-EAEVAKMESDVAEGQVVVAPYFSSIDTAASRAFVQACHGFFPENATITAWAEAAYWQTLLLGRAAQAAGSWRVEDVQRHLYDICID-APQGPVRVERQNNHSRLSSRIAEIDARGVFQVRWQSPEPIRPDPYVVVHNLDDWSASMGGGALP |
| 3N0W Chain:A ((6-346)) | ------QVTLGVLTDMSSVYADSAGKGSVAAVQLAIEDVG--GKALGQPVKLVSADYQMKTDVALSIAREWFDRDGVDAIFDVVNSGTALAINNLVKDKKKLAFITAAAADQIGGTECNGYGIGFLYNFTSIVKTVVQAQLAKGYKTWFLMLPDAAYGDLMNAAIRRELTAGGGQIVGSVRFPFET--QDFSSYLLQAKASGAQLIVSTSGGAANINIMKQAREFGLPS-KTQKVGGMIDILTDVKSAGLRVMQGQEYATSFYWN-MDDRTRAFAKRFYAKMGKM--PTNNQAGGYSAALQYLKAVNAIGSKDPQKVFAYLKTIKFDDAVTRHGTLRPGG-RLVRDMYLVRAKKPE------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3N0W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -180968 for 2942 contacts (-61.5/contact) +
2D Compatibility (PS) -37032 + (NN) -23075 + (LL) 2324
1D Compatibility (HY) -6400 + (ID) 2700
Total energy: -247851.0 ( -84.25 by residue)
QMean score : 0.668
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