Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKTRTSRLFRLSALAAGLCLAQAAL--AADPGAAPSYQALPAGNLCPAAAYDSRYNTKY---------LGFFTHLVQAQDD--WL-FRTTYDLRTDFGTSAEGWRELRAL-RDELKRKGIELVVVYQPTRGLVNREKLSPAEKAGFD---YELAKKNYLATIARFRQAGIWTPDFSPLFDEKEEHAYY-------------FKGDHHWTPHGARRSAKI-----VAETLKQVPGFEEIPKKQFESKRVGLLSKLGTFHKAA--AQLCGNSYATQYVDRFETEPVGASDSGDLFGDGGNP-QIALVGTSNSGPAYNFAGFLEEFSGADILNNAVSGGGFDSSLLAYMTSEEFHKNPPKILIWEFATHYDMAQKSFYRQAMPLVDN--GCSGRKTVLS-----------------RKVKLRQGRNEVLLNSAALPIRSGSYVADVTYSDPSVHELKNTIWYMNGRREQLKIEQSKAVDTGGRYVFQLRNDSD--------------W-ADQQFLSLEIEAPEDMPQGLEVQASICQAAPAKASQSVAGR- |
| 4R8A Chain:A ((16-553)) | LPEPFYYLHNFRAVLAWIGERYADLLDDQERAFIAAFAELPEASQALLVRMVMRKGTLFREGKLAYAEIGDTRAAVQPLLALGWVDAQPTLELAQLFGLLK--KDELSQLFRDHLGRANLRKDALLERLQPLFPEARRLAEWQADFAEPVYELRCMALCDRLRLMYFGNLWQ-DWSEFVLADLGIYRYESVEFSADSRGFRLRADVDAYLHLFDCRQRFDLGEPLEELLAGLPG-EPYANPWLEGRRVKLLFQFAQHCEKQRDFDLAQRLYRQSSHPGARLRAIRSLERGERFAEAHALAREASCAPESDAERQGLARLLPRLQGKLGLPRQARAAAPEIDRLDLCLA---FPSEPCSVEWAVREHLEEPGCAVHYVENGLINSLFGLLCWEAIFAAIPGAFFHPFHSAPADLHSADFRQRRAA-LFEACLGRLEDGSYRDAIRCRYRDKFGLQSPFVYWELLGEELLEQALDCLPAAHLRAWFERLLEDIPGNRAGLPDLIQFWPAQRRYRMVEVKGPGDRLQ--DNQLRWLQFCREREMPVAVCYV |
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General information:
TITO was launched using:
| RESULT:
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Template: 4R8A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 6999 for 3111 contacts (2.2/contact) +
2D Compatibility (PS) -47022 + (NN) 5186 + (LL) 460
1D Compatibility (HY) -18400 + (ID) 4100
Total energy: -56877.0 ( -18.28 by residue)
QMean score : 0.115
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