Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEKTRKDVCVPRHVAIIMDGNNRWAKKRLLPGVAGHKAGVDAVRAVIEVCAEAGVEVLTLFAFSSENWQRPADEVSALMELFLVALRREVRKLDENGIRLRIIGDRTRFHPELQAAMREAEAATAGNTRFLLQVAANYGGQWDIVQAAQRLAREVQGGHLAADDISAELLQGCLVTGDQPLPDLCIRTGGEHRISNFLLWQLAYAELYFSDLFWPDFKHAAMRAALADFSKRQRRFGKTSEQVEAEARPSC
2E9A Chain:B ((19-242))
-----------RHVAIIMDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIEALTLYAFS------------ALMELFVWALDSEVKSLHRHNVRLRIIGDTSRFNSRLQERIRKSEALTAGNTGLTLNIAANYGGRWDIVQGVRQLAEKVQQGNLQPDQIDEEMLNQHVCMHELAPVDLVIRTGGEHRISNFLLWQIAYAELYFTDVLWPDFDEQDFEGALNAFANRERR----------------
General information:
TITO was launched using:
RESULT:
Template:
2E9A.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -138062 for 1597 contacts (-86.5/contact) +
2D Compatibility (PS) -23869 + (NN) -18166 + (LL) 2332
1D Compatibility (HY) -21600 + (ID) 5950
Total energy: -205315.0 ( -128.56 by residue)
QMean score : 0.531
(partial model without unconserved sides chains):
PDB file :
Tito_2E9A.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2E9A-query.scw
PDB file :
Tito_Scwrl_2E9A.pdb
: