Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAIEKHNIKLATFIAALFYDLSTQKQVRIPTQIEKRDRELYELVKKSKRPVALLVDETHDLNGHTLTGLKRLLELAEDDSGRRRLSIVLAGHPKLCNDLRRPTMEEIGYRTDIFELQEKMQSAGLPV
3PVS Chain:A ((106-180))
------------------------------------------------RRTILFVDEVHRF------AFLPHIED-----G--TITFIGATTENPSFELN----SALLSRARVYLLKSLST------
General information:
TITO was launched using:
RESULT:
Template:
3PVS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -24242 for 269 contacts (-90.1/contact) +
2D Compatibility (PS) -6215 + (NN) -1954 + (LL) 5544
1D Compatibility (HY) -2400 + (ID) 600
Total energy: -29867.0 ( -111.03 by residue)
QMean score : 0.290
(partial model without unconserved sides chains):
PDB file :
Tito_3PVS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3PVS-query.scw
PDB file :
Tito_Scwrl_3PVS.pdb
: