Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
---------MRNRVRELRAERGWSQAELAGKLEVSRQTVNAIETGRYDPSLPLAFKLARVFGLAIEAIFDDREGQLD
1Y7Y Chain:A ((5-73))
HDHYADLVKFGQRLRELRTAKGLSQETLAFLSGLDRSYVGGVERGQRNVSLVNILKLATALDIEPRELF--------
General information:
TITO was launched using:
RESULT:
Template:
1Y7Y.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -37159 for 420 contacts (-88.5/contact) +
2D Compatibility (PS) -6689 + (NN) -4633 + (LL) 100
1D Compatibility (HY) -4000 + (ID) 1000
Total energy: -53381.0 ( -127.10 by residue)
QMean score : 0.617
(partial model without unconserved sides chains):
PDB file :
Tito_1Y7Y.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Y7Y-query.scw
PDB file :
Tito_Scwrl_1Y7Y.pdb
: