Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNNSNLAAARNLIQVVTGEWKSRCVYVATRLGLADLIES-G---IDSDETLAAAVGSD----AERIHRLMRLLVAFEIFQGD-----T---RDGYANTPTSHLLR-DVE-GSFRDMVLFYGE-EFHAAWTPACEALLSGTPGFELAFGEDFYSYLKRCPDAGRRFLLAMKASNLAFH-EIPRLL-DFR-GRSFVDVGGGSGELTKAILQAEPSARGVMLDREGSLGVARDNLSSLLAGERVSLVGGDMLQEVPSNGDIYLLSRIIGDLDEAASLRLLGNCREAMAGDGRVVVIERTISASEP-SPM---SVLWDVHLFM-ACAGRHRTTEEVVDLLGRGGFAVERIVDLPMETRMIVAARA |
| 1KYZ Chain:A ((18-362)) | ------EANLFAMQLASASVLPMILKSALELDLLEIIAKAGPGAQISPIEIASQLPTTNPDAPVMLDRMLRLLACYIILTCSVRTQQDGKVQRLYGLATVAKYLVKNEDGVSISALNLMNQDKVLMESWYHLKDAVLDGGIPFNKAYGMTAFEYHGTDPRFNKVFNKGMSDHSTITMKKILETYTGFEGLKSLVDVGGGTGAVINTIVSKYPTIKGINFDLPHVIEDAPSY-------PGVEHVGGDMFVSI-PKADAVFMKWICHDWSDEHCLKFLKNCYEALPDNGKVIVAECILPVAPDSSLATKGVVHIDVIMLAHNPGGKERTQKEFEDLAKGAGFQGFKVHCNAFNTYIMEFL-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1KYZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -177253 for 2420 contacts (-73.2/contact) +
2D Compatibility (PS) -34580 + (NN) -18881 + (LL) 664
1D Compatibility (HY) -18400 + (ID) 3800
Total energy: -252250.0 ( -104.24 by residue)
QMean score : 0.470
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