Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MALTNEDIINAVSEMSVMQVVELIKAMEEKFGVTAAAATVAAAGPAAAAAEEQTEFTIVLAEAGDKKVNVIKVVRELTGLGLKEAKAVVDGAPGVVKEGASKEEAEAAKKALEEAGAKVELK
1XB2 Chain:B ((59-86))
------------------------------------------------------------------SKELLMKLRRKTGYSFINCKKALETCGG----------------------------
General information:
TITO was launched using:
RESULT:
Template:
1XB2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -8048 for 139 contacts (-57.9/contact) +
2D Compatibility (PS) -3064 + (NN) -2295 + (LL) 9512
1D Compatibility (HY) -800 + (ID) 250
Total energy: -4945.0 ( -35.58 by residue)
QMean score : 0.935
(partial model without unconserved sides chains):
PDB file :
Tito_1XB2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1XB2-query.scw
PDB file :
Tito_Scwrl_1XB2.pdb
: