Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------------------------MTRMPLATASLLALAISLAGCGDDKKAEAPATPAASTQPAAPAAAPAAKVD------EAAAKAVIKNYADLAEATFADA----LSTAKDLQKAIDAFLAKPDA-------ETLKAAKEAWF--AARTPYSQSEAFRFGNAIIDDWEG----QVNAWPLDEGLIDYVAKDYQHALGNPGATANIVANTEIQVGEDKIDVKEITGEKLASLNELGGS-EANVATGYHAIEFLLWGQDLNGTGPGAGNRPATDYAQGKDCTGGHCDRRAAYLKAVTDLLVSDLEYMAGQWKAGVADNYR-----AKLEAEPVDTGLRKM--FFGMGSLSLGELAGERMKVALEANS--------TEDEHDCFSDDTHHTLFFNGKSIRNIYLGEYKRIDGSVVKGPSLADLVAKADAAA----NDTLKADLADTEAKLQAIVDSAEKDGVHFDQMIAP----------------------DNKDGQQKIRDAI----------------AALVKQTGAIEQAAGKLGIQDLKPDNADHEF-------------------- |
| 2J7U Chain:A ((8-618)) | MDVIGERIKRIKEEHNSTWHYDDENPYKTWAYHGSYEVSSMINGVVKLLTKPWDVVPMVTQMAMTDTTPFGQQRVFKEKVDTRTPRPLPGTRKVMEITAEWLWRTLGRNKRPRLCTREEFTKKVRTNDSAKAAVEDEEFWKLVDRERELHKLGKCGSCVSRAIWYMWLGARYLEFEALGFLNEDHWFSRENSYSGVEGEGLHKLGYILRDISKIPGGAMYADDTAGWDTRITEDDLHNEEKIIQQMDPEHRQLANAIFKLTYQNKVVKVQRPTPTGTVMDIISRKDQRGSG-QVGTYGLNTFTNMEAQLVRQMEGEGVLTKADLENPHLLEKKITQWLETKGVERLKRMAISGDDCVVKPIDDRFANALLALNDMGKVRKDIPQWQPSKGWHDWQQVPFCSHHFHELIMKDGRKL---VVPCRPQDELIGRARISQGAGWSLRETACLGKAYAQMWSLMYFHRRDLRLASNAICSAVPVHWVPTSRTTWSIHAHHQWMTTEDMLTVWNRVWIEENPWMEDKTPVTTWENVPYLGKREDQWCGSLIGLTSRATWAQNIPTAIQQVRSLIGNEEFLDYM |
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General information:
TITO was launched using:
| RESULT:
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Template: 2J7U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 90164 for 3320 contacts (27.2/contact) +
2D Compatibility (PS) -47138 + (NN) -8946 + (LL) -220
1D Compatibility (HY) -6000 + (ID) 3100
Total energy: 24760.0 ( 7.46 by residue)
QMean score : 0.268
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