Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------------------------------------------MFRPRLLLTSLAIALGACSPQDPQAVTSAALAQQVILPTYSRWVEADQALASSALAYCQGKEDLAKARDAFHAAQKAWAELQPLLIGPLAEGNRAWQVQFWPDKKDLVGRQVEQLLKNNPQVDAAALAKASVVVQGLSAYEYILFDSKIDLADAATKA-----------RYCPLLEAIGTHQQ--QLAQDILARWKNDGGMLTQMSKFPNDRYADAHEAIAELLRVQVTALDML--KKKLGTPLGRQSKGIPQPYQAEAWRSNASLASLDASLSGAQALWEGIDGKGLKTLLPAEQKDLAGKIDAAY---------ADSHAKLAALEQKPLSELLAS--------------EDGRNQLNALYDSL-----NVVHRLHEGDLARALGVQLGFNANDGD |
| 4XRP Chain:C ((1-435)) | MILQIHSQNPHLLDLLNKNPHTDLGIYAKSLRNGQLIGNAVSAYQYDVVFQDTRYSYLPEESNQIDFQSYCSPLVILHICNEFFKELLQEKQTYWSQQIKWLERTRAEVDTYPCTIEVKNLYANSTWYSKGHFMMERYFKNIHI----TPIVGNNLSLRVEGKSVFEAMNLLSFIAVTTHITNTYGEYTYIDDHFAQKYARILTNIPQVPYFVFYLFIKRAIKSERQFAEIKPMFEAYFKEEGLDIDFQF---TDTHGSRMDFIVKELGMEYPILDIGCGELKYYRRFMRRNYNYSHPYFATDTDKS--------VGDYAALLKERMEADNLYFFSDWTDYEYKNPVNIILTEVIEHNTPEAAEALVKHCLSLNFHKMIITTPNSLFNKYYFHHFEWTPQEFQDFIRHCVGDTSLEVTYCGIGDRINGETPTQAVVITR-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4XRP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -23293 for 2361 contacts (-9.9/contact) +
2D Compatibility (PS) -35030 + (NN) -8626 + (LL) 464
1D Compatibility (HY) -12400 + (ID) 2000
Total energy: -80885.0 ( -34.26 by residue)
QMean score : 0.203
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