Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSVEAAKNARELLLKEYRAVLSTHSKKWPGFPFGSVVPYCLDAEGRPLILISRIAQHTHNLQADPRCSMLVGERGAEDIQAVGRLTLLAEARQLAEEEVAAAAERYYRYFPESADYHRVHDFDFWVLQPVQWRFIGGFGAIHWLAAERVPLANPFAGEAERGMVEHMNSDHAAAIAHYVELAGLPAHAAAQLAGIDTEGFHLRIGQGLHWLPFPAACGNPGAVRQALVQLARAERWPTVEPEQG
2ARZ Chain:A ((5-242))
-SVEAAKNARELLLKEYRAVLSTHSKKWPGFPFGSVVPYCLDAEGRPLILISRIAQHTHNLQADPRCSMLVGERGAEDIQAVGRLTLLAEARQLAEEEVAAAAERYYRYFPESADYHRVHDFDFWVLQPVQWRFIGGFGAIHWLAAERVPLANPFAGEAERGMVEHMNSDHAAAIAHYVELAGLPAHAAAQLAGIDTEGFHLRIGQGLHWLPFPAACGNPGAVRQALVQLARAERWPTV-----
General information:
TITO was launched using:
RESULT:
Template:
2ARZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -139020 for 1820 contacts (-76.4/contact) +
2D Compatibility (PS) -25732 + (NN) -13505 + (LL) 224
1D Compatibility (HY) -31200 + (ID) 11900
Total energy: -221133.0 ( -121.50 by residue)
QMean score : 0.509
(partial model without unconserved sides chains):
PDB file :
Tito_2ARZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ARZ-query.scw
PDB file :
Tito_Scwrl_2ARZ.pdb
: