Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNSPHLERGGLPIREVTRLTGVHPVTLRAWERRYGLVVPQ-RTGKGHRLYSEEQVERIRRILVWLERGVAISQVRALLERPEETPAADVESPWERLHEQLLDAIAALAERRLDDLFNQAASLYPVATLCEKLLQPLLQHLERRWQGQFGARMERAFFFSWLRSKLGARLYHQQRLQQGAPLLLVNQSELSLEPNLWLCSWLLGSGEVPLQVFDWPLPPAELALACERLEARGVLLYASHRLNPEHLPRLLAGVSCPVVLVGPAVEIQREAFETLALTGLLLASTPLEARRLLGERGLLNP |
3GP4 Chain:A ((2-73)) | ---------SLNIKEASEKSGVSADTIRYYERI-GLIPPIHRNESGVRKFGAEDLRWILFTRQMRRAGLSIEALIDYLALFR-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GP4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -43815 for 467 contacts (-93.8/contact) +
2D Compatibility (PS) -7989 + (NN) -3819 + (LL) 17952
1D Compatibility (HY) -2800 + (ID) 1000
Total energy: -41471.0 ( -88.80 by residue)
QMean score : 0.777
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