Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSSTLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGEL-SAKTRVLPLTLDVRDRAAMSAAVDNLPEEFATLRGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKWPYPGSHVYGGTKAFVEQFSLNLRCDLQGTGVRVTNLEPGLCESEFSLVRFGGDQARYDKTYAGAHPIQPEDIAETIFWIMNQPAHLNINSLEIMPVSQSWAGFAIHRES
3TFO Chain:B ((3-239))
MDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWGRIDVLVNNAGV-MPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSG-QIINIGSIGALSVVPTAAVYCATKFAVRAISDGLR--QESTNIRVTCVNPGVV-----------------------IALQPADIARAVRQVIEAPQSVDTTEITIRPTA------------
General information:
TITO was launched using:
RESULT:
Template:
3TFO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -133792 for 1815 contacts (-73.7/contact) +
2D Compatibility (PS) -23295 + (NN) -8863 + (LL) 2356
1D Compatibility (HY) -16800 + (ID) 3650
Total energy: -184044.0 ( -101.40 by residue)
QMean score : 0.498
(partial model without unconserved sides chains):
PDB file :
Tito_3TFO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3TFO-query.scw
PDB file :
Tito_Scwrl_3TFO.pdb
: