Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIRMALKPLVAACLLASLSTAPQAAPSPYSTLVVFGDSLSDAGQFPDPAGPAGSTSRFTNRVGPTYQNGSGEIFGPTAPMLLGNQLGIAPGDLAASTSPVNAQQGIADGNNWAVGGYRTDQIYDSITAANGSLIERDNTLLRSRDGYLVDRARQGLGADPNALYYITGGGNDFLQGRILN-----DVQAQQAAGRLVDSVQALQQAGARYIVVWLLPDLGLTPATFGGPLQPFASQLSGTFNAELTAQLSQAGANVIPLNIPLLLKEGMANPASFGLAADQNLIGTCFSGNGCTMNPTYGINGSTPDPSKLLFNDSVHPTITGQRLIADYTYSLLSAPWELTLLPEMAHGTLRAYQDELRSQWQADWENWQNVGQWRGFVGGGGQRLDFDSQDSAASGDGNGYNLTLGGSYRIDEAWRAGVAAGFYRQKLEAGAKDSDYRMNSYMASAFVQYQENRWWADAALTGGYLDYDDLKRKFALGGGERSEKGDTNGHLWAFSARLGYDIAQQADSPWHLSPFVSADYARVEVDGYSEKGASATALDYDDQKRSSKRLGAGLQGKYAFGSDTQLFAEYAHEREYEDDTQDLTMSLNSLPGNRFTLEGYTPQDHLNRVSLGFSQKLAPELSLRGGYNWRKGEDDTQQSVSLALSLDF |
| 3RJT Chain:A ((6-213)) | --------------------------EPGSKLVMVGDSITDCGRAHPV-GE-------APRG----------GLGNGYVALVDAHLQVLH----P--------DWRIRVVNVGTSGNTVADVAR--------------RWEDDV----M--------ALQPDYVSLMIGVNDVWRQFDMPLVVERHVGIDEYRDTLRHLVATTKPR-VREMFLLSPFYLE--PNR-----SDPMRKTVDAYIEAMRDVAAS--EHVPFVDVQAEFDRLLAH-----------------------------------LNTWVLAPDRVHPYLNGHLVIARAFLTAV---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3RJT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -87095 for 1740 contacts (-50.1/contact) +
2D Compatibility (PS) -21858 + (NN) -9401 + (LL) 19176
1D Compatibility (HY) -6800 + (ID) 1800
Total energy: -107778.0 ( -61.94 by residue)
QMean score : 0.445
|
|
|