Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHSLQAKILDPRLGSDFPLPQYATPGSAGLDLRAMLKEDSVLGPGQTLLIPTGLSIYIADPGLAALVLPRSGLGHKHGIVLGNLVGLIDSDYQGELMVSCWNRGESPFTIAVGERIAQLVLVPVVQAHFELVEAFDESQRGAGGFGHSGSH
1Q5H Chain:C ((13-142))
-----------RLSEHATAPTRGSARAAGYDLYSAY--DYTIPPMEKAVVKTDIQIALPS-GCYGRVAPRSGLAAKHFIDVG--AGVIDEDYRGNVGVVLFNFGKEKFEVKKGDRIAQLICERIFYPEIEEVQALDDTERGSGGFG-----
General information:
TITO was launched using:
RESULT:
Template:
1Q5H.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -91594 for 810 contacts (-113.1/contact) +
2D Compatibility (PS) -14093 + (NN) -7136 + (LL) 876
1D Compatibility (HY) -7600 + (ID) 2400
Total energy: -121947.0 ( -150.55 by residue)
QMean score : 0.355
(partial model without unconserved sides chains):
PDB file :
Tito_1Q5H.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Q5H-query.scw
PDB file :
Tito_Scwrl_1Q5H.pdb
: