Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVEMLPTAILLVLAVSVVAKDNATCDGPCGLRFRQNPQGGVRIVGGKAAQHGAWPWMVSLQIFTYNSHRYHTCGGSLLNSRWVLTAAHCFVGKNNVHDWRLVFGAKEITYGNNKPVKAPLQERYVEKIIIHEKYNSATEGNDIALVEITPPISCGRFIGPGCLPHFKAGLPRGSQSCWVAGWGYIEEKAPRPSSILMEARVDLIDLDLCNSTQWYNGRVQPTNVCAGYPVGKIDTCQGDSGGPLMCKDSKESAYVVVGITSWGVGCARAKRPGIYTATWPYLNWIASKIGSNALRMIQSATPPPPTTRPPPIRPPFSHPISAHLPWYFQPPPRPLPPRPPAAQPRPPPSPPPPPPPPASPLPPPPPPPPPTPSSTTKLPQGLSFAKRLQQLIEVLKGKTYSDGKNHYDMETTELPELTSTS |
| 3BG8 Chain:A ((1-236)) | ------------------------------------------IVGGTASVRGEWPWQVTLHTT--SPTQRHLCGGSIIGNQWILTAAHCFYGVESPKILRVYSGILNQSEI-----KEDTSFFGVQEIIIHDQYKMAESGYDIALLKLETTVNYTDSQRPISLPSKGERNVIY-TDCWVTGWGYRKLRDK-IQNTLQKAKIPLVTNEECQKR-YRGHKITHKMICAGYREGGKDACKGDSGGPLSCKHN--EVWHLVGITSWGEGCAQRERPGVYTNVVEYVDWILEKTQ----------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3BG8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -184429 for 2015 contacts (-91.5/contact) +
2D Compatibility (PS) -25627 + (NN) -14193 + (LL) 4028
1D Compatibility (HY) -13600 + (ID) 4450
Total energy: -238271.0 ( -118.25 by residue)
QMean score : 0.251
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