Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTNLNASQANHRNFILTGIPGTPDKNPWLAFPLGFLYTLTLLGNGTILAVIKVEPSLHEPTYYFLSILALTDVSLSMSTLPSMLSIYWFNAPQIVFDACIMQMFFIHVFGIVESGVLVSMAFDRFVAIRNPLHYVSILTHDVIRKTGIAVLTRAVCVVFPVPFLIKCLPFCHSNVLSHSYCLHQNMMRLACAS-TRINSLYGLIVVIFTLGLDVLLTLLSYVLTLKTVLGIVS-----------RGERLKTLSTCLSHMSTVLLFYVPFMGAASMIHRFWEHL-SPV-V--HMVMADIYLLLPPVLNPIVYSVKTKQI |
| 2KS9 Chain:A ((35-312)) | ----------------------------WAAAYTVIVVTSVVGNVVVMWIILAHKRMRTVTNYFLVNLAFAEASMAAFNTVVNFTYAVHNEWYYGLFYCKFHNFFPIAAVFASIYSMTAVAFDRYMAIIHPLQPRL--SATATKVVICVIWVLALLLAFPQGYYSTT-E----TMPSRVVCMIEWP----EHPNKIYEKVYHICVTVLIYFLPLLVIGYAYTVVGITLWASEIPGDSSDRYHEQVSAKRKVVKMMIVVVCTFAICWLPFHIF-FLLPYINPDLYLKKFIQQVYLAIMWLAMSSTMYNPIIYCCLNDRF |
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General information:
TITO was launched using:
| RESULT:
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Template: 2KS9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -222761 for 2069 contacts (-107.7/contact) +
2D Compatibility (PS) -26158 + (NN) -7156 + (LL) 2292
1D Compatibility (HY) -19200 + (ID) 2150
Total energy: -275133.0 ( -132.98 by residue)
QMean score : 0.173
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