Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MADKVQTTLLFLAVGEFSVGILGNA-------FIGLVNCMDWVKKRKIASIDLILTSLA----ISRICLLCV------ILLDCFILVLYPDVYATGKEMRIIDFFWTLTNHLSI------WFATCLSIYYFFKIGNFFHPLFLWMKWRIDRVISWILLG-----------------CVVLSVFISLPATENLNADFRFCVKAKRKTNLTWSCRVNKTQHASTKLFLN--LATLLPFCVCLMSFFLLILSLRRHIRRMQLSATGCRDPSTEAHVRALKAVISF------------LLLFIAYYLSFLIATSSYFMPETE--------------LAVIFGESIALIYPSSHSFILILGNNKLRHAS-----------LKV---IWKVMSILKGRKFQQHKQI-- |
| 4XGC Chain:E ((1-458)) | MEAICSSLEPLFPCREAAIETLGELIGDSSETYPSAIYLFGHSGTGKTALTRAFLKECGKRQNVRTAHLNAIECYTTKIMLEILLDSLAPDQGDALKVDNMLDFVEQLRRQAATRVEDQGFLIAVDNAERLRDMDANVLPVLLRLQELTNLNLCVILLSQLPFEKFYNKTGLSEIVCLHLAQYNKAETQRILGSDFQQVRNQLLEQKKRLEICQEAVTEDFYNNYLNLFLSVFYKACRDVPELQLTARKCLSTYLEPVLDGTSRLWRHIAGPLRSALTQIYMRIESLELPYYAKFLLIAAFLASHNAAKQDKRLFSTTLGPKSFSIDRLLAIFYAILEEKVGLTCNLLSQISTLVHLNLLSFVSGEQNIMEGSARLQCTIGLEFVLQIGKVVGFNVRQYLCD |
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General information:
TITO was launched using:
| RESULT:
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Template: 4XGC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -284093 for 2122 contacts (-133.9/contact) +
2D Compatibility (PS) -32646 + (NN) -5598 + (LL) 0
1D Compatibility (HY) -10000 + (ID) 2650
Total energy: -334987.0 ( -157.86 by residue)
QMean score : 0.232
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