Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MASKDFAIGMILLSQIMVGFLGNFFLLYHYSFLCFTRGML-----QSTDLILKHLTIANSLVILSKGI-------PQTMAAFGLKDSLSDIGCK-----------FVFYVHRVGRAVCVGNACLLSVFQV--------ITISPSEFRWAELKLHAHKYIRSFILVL--CWILNTLVNITVLLHVTGKWNSINSTKTNDYGYCSGGSRSRIPHSLHIVLLSSLDVLCLGLMTLASGSMVFILHRHKQQVQHIHGTNLSARSSPESRVTQSILVLVSTLCYFTRSPPSLHMSLFPNPSWWLLNTS---ALITACFPM-----VSPFVLMSRHPRIPRLGSACCGRNPQFPKLVR |
| 4B46 Chain:A ((1-367)) | -----MKLAMIGFGQAGGKVVDKFVEYDRERNAGIVRAAVAVNSAKADLLGLKNIPKDQRVLIGQSRVKGHGVGADNELGAEIAEEDIDEVQGAIDSIPVHEVDAFLVVSGLGGGTGSGGAPVLAKHLKRIYTEPVYGLGILPGSDEGGIYTLNAARSFQTFVREVDNLLVFDNDAWRKTGESVQGGYDEINEEIVNRFGVLFG---SVVDSSEIINTLAGGGVSTVGYASEGVT--AHTTNRITSLVRKAALGRLTLPCEIEG-AERALLVLAGP-------PEHLNRKGIERGRKWIEEQTGSMEVRGGDYPIPGAEKVAGVILLSGVTNVPRIKELQQVAIEAQD---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4B46.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -297302 for 2504 contacts (-118.7/contact) +
2D Compatibility (PS) -29978 + (NN) -2628 + (LL) 1604
1D Compatibility (HY) -5200 + (ID) 2400
Total energy: -335904.0 ( -134.15 by residue)
QMean score : 0.234
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