Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------------------MAVRLIPDNLNIKFSKYRKLTALISIILVIFSLFIVVLRGVNLGIDFTGGILMEIKSSSEDHAVLNILKENGFTI-----QSSKAGNNLVMYFREEG-----------------------------NEGKIKKIKSVLEEKLGSSISYRKIDYI------------GPRISSTQILEGILSMFIAIVGIFFYVWFRF-------------NWQCGFGGTIALIHDVILTVGFV---SLTGIKFNISSVAALLTVIGYSIN-----------------NSVVIYDRIREYQKSGK-NRQMSDIVDASINVT-LFRTVLTSGTTLLATIPLTLICTDTVRDFSLIIFFGILIGTCSAIFISAPILTCKVLISRIAV---------------------------- |
| 2I57 Chain:A ((4-422)) | FRIAQDVVARENDRRASALKEDYEALGANLARRGVDIEAVTAKVEKFFVAVPSWGVGTGGTRFARFPGTGEPRGIFDKLDDCAVIQQLTRATPNVSLHIPWDKADPKELKARGDALGLGFDAMNSNTFSDAPGQAHSYKYGSLSHTNAATRAQAVEHNLECIEIGKAIGSKALTVWIGDGSNFPGQSNFTRAFERYLSAMAEIYKGLPDDWKLFSEHKMYEPAFYSTVVQDWGTNYLIAQTLGPKAQCLVDLGHHAPNTNIEMIVARLIQFGKLGGFHFNDSKYGDDDLDAGAIEPYRLFLVFNELVDAEARGVKGFHPAHMIDQSHNVTDPIESLINSANEIRRAYAQALLVDRAALSGYQEDNDALMATETLKRAYRTDV---EPILAEARRRTGGAVDPVATYRASGYRARVAAERPAS |
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General information:
TITO was launched using:
| RESULT:
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Template: 2I57.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -215934 for 2111 contacts (-102.3/contact) +
2D Compatibility (PS) -30223 + (NN) 185 + (LL) 284
1D Compatibility (HY) 1200 + (ID) 1600
Total energy: -246088.0 ( -116.57 by residue)
QMean score : 0.149
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