Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEEEPVEKKWRIKRSAARFLAVQVAYSNIFMGY-DKSTFELENCGLRNYVGKLADIFECEEFDYQFLEKLLYKVIRSGGEYDKIIEYYLHPSWSLLRLNLVSLSILRVAVCELANC-DTPAPVVINEYTNIASDLLDKPSEIGFINGLLDKAKSAVKLNKNS
1TZV Chain:A ((1-138))
---------MKTPRRRMRLAVFKALFQHEFRRDEDLEQIL--EEILD---------ETYDKKAKEDARRYIRGIKENLSMIDDLISRYL-EKWSLNRLSVVDRNVLRLATYELLFEKDIPIEVTIDEAIEIAKRYGTE-NSGKFVNGILDRIAKEHAPKEKF
General information:
TITO was launched using:
RESULT:
Template:
1TZV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -81040 for 1020 contacts (-79.5/contact) +
2D Compatibility (PS) -14003 + (NN) -1751 + (LL) 1532
1D Compatibility (HY) -3600 + (ID) 1600
Total energy: -100462.0 ( -98.49 by residue)
QMean score : 0.517
(partial model without unconserved sides chains):
PDB file :
Tito_1TZV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1TZV-query.scw
PDB file :
Tito_Scwrl_1TZV.pdb
: