Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSNYIQNSGTRVIRDELQATGKVRENEDQPVENIKITNDHAFYKLICEKLVQGDFSVEQFNLLHYDISEKMIEKPFTIKEINDFCEKNDIPLFTVNELLTLVPKDDIKCYVDYETDSVRNHDHGYIADQINIKASYIKADLVNHQSYQDYITDSDTYYGFIYKKLIVSDALEKLERGETEAQIRESLGNINRKEIKELLEKVPQGSLKEWLSDPANKGYTDVEYHVLYEKISEELVHTSMSINRIKEIYDKYGIVPPTESEFESLKKVQGEKRSIEYHEQKTGLTFQGRINLNVTDNNADNEFSLNID-LFQNKNFE-DLTDQNGDGVINNEGLL-K-SLEDTVKTFNEVFGIKKDNNPLLVYGNIANFRLFLFES-KESYQ--KYLSGDH-----DAHIPGGGVAQFSDNNYISNMYSHAENARSDFNGDKE-GNCKDYNYVIKH---------ELVHALTFY-LTSKLDLGKVLMEG-----LAEYVTHLTEGEKPADFAK----LVGE----EYKE-HTLEEIIKGAVDPYQTGAAIIAYIEETYPNFIDN---LLYAATEDRKTLNGRFYFKEMMQKIYQSEEDKIQKGEGFSNWVKTYSSAENITIEPGHAQHEQQAVGNEKDEAQSYSSKGQVSEDRTEVHPTGSFRGLEVPKKPVIHEQNKGQENIVLKDTILKIEKSYERDSEGKHKANVIIDYYDMKALYDRVAGAKKQSVLKFWNKLAESEYKVGALSEDKYYFKDGKFVIHDSNEKKLVVLPEDKVSIKIMKDGNHYDLAISNKEGKVISSITKIDNLNYELLLDISDFSLEAQDSTTFSDQHNEYDLYLENGLVKMFDCASDHIYHDHSLI |
4KSJ Chain:A ((2-269)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SRLSVAPEMDI------MDYCKKEWRGN-TQKATCMKMGYEEVSQKFTSIRRVRGDNY--------CALRATLFQAMSQAVGLPPWLQDPELMLLPEKLISKYNWIKQWKLDLVDKIKESLTLLRKKWAGLAEMRTAEARQIACDELFTNEAEEYSLYEAVKFLMLNRAIELYNDKEKGKEVPFFSVLLFARDTSNDPGQLLRNHLNQVGHTGGLEQVEMFLLAYAVRHTIQVYRLSKYNTEEFITVYPTDPPKDWPVVTLIAEDDRHYNIPVR--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4KSJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -12795 for 1504 contacts (-8.5/contact) +
2D Compatibility (PS) -22881 + (NN) -8676 + (LL) 38276
1D Compatibility (HY) -7600 + (ID) 1700
Total energy: -15376.0 ( -10.22 by residue)
QMean score : 0.135
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