Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLEVNILDKKWYSIVEDPKGFTLNIINASLKEL--KIDQYKPNISIALADDNLLHQLNLRFRQMNKPTNVLSFPC-EQLSSECDLGDIAISIDTVRKESDEYHIPIPAHVAHMLVHGLLHLLGYDHQK-KGEEVVMKNLEGKILASLGYNMCAI
1OZ9 Chain:A ((8-148))
--------KNRVLVKLKKRKVRKDKIEKWAELALSALGLNNVELSVYITDDQEIRELNKTYRKKDKPTDVLSFPMGEEFGGYKILGDVVISQDTAERQARELGHSLEEEVKRLIVHGIVHLLGYDHEKGGEEEKKFRELENYVLSKLSK-----
General information:
TITO was launched using:
RESULT:
Template:
1OZ9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -76556 for 1010 contacts (-75.8/contact) +
2D Compatibility (PS) -14689 + (NN) -8288 + (LL) 1436
1D Compatibility (HY) -7200 + (ID) 2150
Total energy: -107447.0 ( -106.38 by residue)
QMean score : 0.382
(partial model without unconserved sides chains):
PDB file :
Tito_1OZ9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1OZ9-query.scw
PDB file :
Tito_Scwrl_1OZ9.pdb
: