Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAYEHKWYIIKVNYGHERNILELVSNAVYFKEVFIPYQTVCNSKSDIKEVCEVYVCMYLCDESRDILSKTLGFHSGDSSNFKIVLDEEVNLKRKEFNKYKWYILRVASNYEEKVCQHVLENSMRLGVNDYFKEVFIPYEELSEVELRSKKAAMRRKCFPGYVFLYVDLCDEVLNFVNNIPKSLKVYGFLKNGSVPKVISDDEIYSMCNALYNAQETKKLSHGYEKGEKVKINDGLFQNFTGKVDMINDEKKIINIEVSILGKPTIIELDLAQVEKIED |
3LPE Chain:A ((9-90)) | -------------------------------------------------------------------------------------------------AHMIFAVRTMVGQEKNIAGLMASRAE---------KE--Q---------LDVYSILASESLKGYVLVEAETKGDVEELIKGMPRVR---GI-----VPGTIAIEEIEPLLTP--------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LPE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -58649 for 572 contacts (-102.5/contact) +
2D Compatibility (PS) -9039 + (NN) -5145 + (LL) 14352
1D Compatibility (HY) -1600 + (ID) 650
Total energy: -60731.0 ( -106.17 by residue)
QMean score : 0.556
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