Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRIVNGPIIMTREERMKIVHEIKERILDKYGDDVKAIGVYGSLGRQTDGPYSDI-----EMMCVMSTEEAEFSHEWTTGEWKVEVNFDSEEILLDY----ASQVESDWPLTHGQFFSILPIYDSGGYL-EKVYQTAKSVEAQTFHDAICALIVEELFEYAGKWRNIRVQ-GPTTFLPSLTVQVAMA---GAMLIGLHHRIC--YTTSASV-LTEAVKQSDLPSGYDHLCQFVMSGQLSDSEKLLESLENFWNGIQEWTE-RHGYIVDVSKRIPF--------------------------------- |
| 1K8W Chain:A ((22-324)) | MDI-NGVLLLDKPQGMS-SNDALQKVKRIYN--ANRAGHTGALDPLATGMLPICLGEATKFSQYLLDSDKRYRVIARLGQRTDTSDADGQIVEERPVTFSAEQLAAALDTFRGDIEQIPSMYSALKYQGKKLYEYARQGIEVPREARPITVYELLFIRHEGNELELEIHCSKGTYIRTIIDDLGEKLGCGAHVIYLRRLAVSKYPVERMVTLEHLRELVEQAEQQDIPAAELLDPLLMPMDSPASDYPVVNLPLTSSVYFKNGNPVRTSGAPLEGLVRVTEGENGKFIGMGEIDDEGRVAPRRLVVE |
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General information:
TITO was launched using:
| RESULT:
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Template: 1K8W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -71976 for 1811 contacts (-39.7/contact) +
2D Compatibility (PS) -25476 + (NN) 5040 + (LL) 244
1D Compatibility (HY) -1600 + (ID) 1750
Total energy: -95518.0 ( -52.74 by residue)
QMean score : 0.177
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