Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MINQVYQLVAPR-QFEVTYNNVD-IYSDYVIVRPLYMSICAADQRYYTGSRDENVLSQKLPMSLIHEGVGEVVFDSKG--VFNKGTKVVMVPNTPTEKD---DVIAENYLKSSYFRSSGHDGFMQDFVLLNHDRAVPLPDDIDLSIISYTELVTVSLHAIRRFEKKSISNKNTFGIWGDGNLGYITAILLRKLYPESK-IYVFGKTDYKLSHF-SFVDDVFFINK--------IPEGLTFDHAFECVGGRGSQSAINQMIDYISPEGSIALLGVSEFPVEVNT-RLVLEKGLTLIGSSRSG-SKDFQDVVDLYIQYPDIVDKLALLKGQEYEIATINDLTEAFEADLSTSWGKTVLKWIM |
| 2DQ4 Chain:A ((1-342)) | --MRALAKLAPEEGLTLVDRPVPEPGPGEILVRVEAASICGTDLHIWKWDAWAR-GRIRPPLVTGHEFSGVVEAVGPGVRRPQVGDHVSLESHIVCHACPACRTGNYHVCLNTQILGVDRDGGFAEYVVVPAENAWVNPKDLPFEVAAILEPFGNAVHTVYAGS---GVSGKSVLITGAGPIGLMAAMVVRA-SG-AGPILVSDPNPYRLAFARPYADRLVNPLEEDLLEVVRRVTGSGVEVLLEFSGN---EAAIHQGLMALIPGGEARILGIPSDPIRFDLAGELVMRGITAFGIAGRRLWQTWMQGTALVY-SGRV--DLSPLLTHRLP---LSRYREAFGLLASGQAVKVILDPK- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2DQ4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -199942 for 2817 contacts (-71.0/contact) +
2D Compatibility (PS) -34996 + (NN) -8440 + (LL) 1728
1D Compatibility (HY) -8800 + (ID) 2950
Total energy: -253400.0 ( -89.95 by residue)
QMean score : 0.466
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