Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRTLNKDEHNYIKQIANIHETLLSQAE-SNYKCTKLSIALRYEMICSRLEHTNDKIYIYENEGQLIAFIWGHFSNEKSMVNIELLYVEPQFRKLGIATQLKIALEKWAKTMNAKRISSTIHKNNLPMISLNKDLGYQVSHVKMYKDID
2FIA Chain:A ((3-139))
IRVADEKELPMILQFLTEVKAYMDVVGITQWTKD----YPSQGDIQEDITK--KRLYLLVHEEMIFSMATFCMEQEQDFVWLKRFATSPNYIAKGYGSLLFHELEKRAVWEGRRKMYAQTNHTNHRMIRFFESKGFTKIHESL-----
General information:
TITO was launched using:
RESULT:
Template:
2FIA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -85038 for 932 contacts (-91.2/contact) +
2D Compatibility (PS) -14234 + (NN) -2164 + (LL) 596
1D Compatibility (HY) -4000 + (ID) 1050
Total energy: -105890.0 ( -113.62 by residue)
QMean score : 0.521
(partial model without unconserved sides chains):
PDB file :
Tito_2FIA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FIA-query.scw
PDB file :
Tito_Scwrl_2FIA.pdb
: