Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTHIQLDFSKTLEFFGEHELKQQQ-----EIVKSIHKTIHEGT---GAGSDFLGWVDL--PVD------------YDKEEFSRIVEASKRIK---------ENSDVLVVIGIGGSYLGARAAIEMLTSSFRNSNEYPEIVFVGNHLSSTYTKELVDYLADKDFSVNVISKSGTTTEPAVAFRLFKQLVEERYGKEEAQKRIFATTDKEKGALKQLATNEGYETFIVPDDVGGRYSVLTAVGLLPIATAGIN-IEAMMIGAAKAREELSSDKL-EDNIAYQYATIRNILYA-KGYTTEMLINYEPSMQYFNEWWKQLFGESEGKDF----------KGIYPSSANYTTDLHSLGQYVQEGRRFLFETVVKVNHPKYDITIEKDS-DD---------LDGLNYLAGKTIDEVNTKAFEGTLLAHT--DGGVPNMVVNIPQLDEETFGYVVYFFELACAMSGYQLGVNPFNQPGVEAYKQNMFALLGKPGFEDLKKELEERL |
2WU8 Chain:A ((44-521)) | --DLYIDYSKHR--VTRETLALLIDLARTAHLEERRDQMFAGVHINTSEDRAVLHTALRLPRDAELVVDGQDVVTDVHAVLDAMGAFTDRLRSGEWTGATGKRISTVVNIGIGGSDLGPVMVYQALRHYAD---AGISARFV-SNVDPADLIATLADLDPATTLFIVASKTFSTLETLTNATAARRWLTDALGDAAVSRHFVAVSTN-KRLVDDFGIN-TDNMFGFWDWVGGRYSVDSAIGLSLMTVIGRDAFADFLAGFHIIDRHF-ATAPLESNAPVLLGLIGLWYSNFFGAQSRTVLPYSNDLSRFPAYLQQLTMESNGKSTRADGSPVSADTGEIFWGEPGTNGQHAFYQLLHQGTRLVPADFIGFAQPLDDLPTAEGTGSMHDLLMSNFFAQTQVLAFGKTAEEIAADGTPAHVVAHKVMPGNRPSTSILASRLTPSVLGQLIALYEHQVFTEGVVWGIDSFDQWGVELGKTQAKALLPVITGA---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2WU8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -160663 for 3414 contacts (-47.1/contact) +
2D Compatibility (PS) -46690 + (NN) -26313 + (LL) 1308
1D Compatibility (HY) -9600 + (ID) 4350
Total energy: -246308.0 ( -72.15 by residue)
QMean score : 0.456
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