Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVDVAFVCLGNICRSPMAEAIMRQRLKDRNIHDI--KVHSRGTGSWNLGEPPHEGTQKILNKHNIPFDGMISEL-FEATDDFDYIVAMDQSNVDNIKSINPNLKGQLFKLLEFSNMEESD------VPDPYYTNNFEGVYDMVLSSCDNLIDYIVKDANLKEG
1D1Q Chain:A ((8-136))
-ISVAFIALGNFCRSPMAEAIFKHEVEKANLENRFNKIDSFGTSNYHVGESPDHRTVSICKQHGVKINHKGKQIKTKHFDEYDYIIGMDESNINNLKKIQP--EGSKAKVCLFGDWNTNDGTVQTIIEDPWY-------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1D1Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -46723 for 900 contacts (-51.9/contact) +
2D Compatibility (PS) -12777 + (NN) -5788 + (LL) 1904
1D Compatibility (HY) -11200 + (ID) 2250
Total energy: -76834.0 ( -85.37 by residue)
QMean score : 0.519
(partial model without unconserved sides chains):
PDB file :
Tito_1D1Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1D1Q-query.scw
PDB file :
Tito_Scwrl_1D1Q.pdb
: