Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTTQHSKTDVILIGGGIMSATLGTLLKELSPEKNIKVFEKLAQPGEESSNVWNNAGTGHSALCELNYTKEGKDGTVDCSKAIKINEQYQISKQFWAYLVKTGQLDNPDRFIQAVPHMSFVIGEDN--------VAFIKSRVATLKK-SVLFEKMKLSQDEEEMKSWVPLMIEGRKSDEPIALTYDETGTDVNFGALTAKLFENLEQRGVGIQYKQNVLDIKKQKSGAWLVKVKDLETNETTTYESDFVFIGAGGASLPLLQKTGIKQSKHIGGFPVSGLFLRCTNQEVIDRHHAKVYGKAAVGAPPMSVPHLDTRFVDGKRSLLFGPFAGFSPKFLKTGSHMDLIKSVKPNNIVTMLSAGIKEMSLTKYLVSQLMLSNDERMDDLRVFFPNAK--NEDWEVITAGQRVQVIKDTEDSKGNLQFGTEVITSDDGTLAALLGA-S-PGASTAVDIMFDVLQRCYRDEFKGWEPKIKEMVPSFGYRLTDHEDLYHKINEEVTKYLQVK |
| 2RGH Chain:A ((29-415)) | ---QQEELDLLIIGGGITGAGVAVQAAAS--GIKTGLIEMQD-FAEGTSS--RSTKLVHGGI---RYLKTF-----D---V-EVVADTVGERAVVQGIAPHI--------PKPDPMLLPIYEDEGATTFNMFSVKVAMDLYDKLANVTGTKYENYTLT-PEEVLEREPFLKK----EGLKGAGVYLDFR-NNDARLVIDNIKKAAEDGAYLVSKMKAVGFLYEGDQIVGVKARDLLTDEVIEIKAKLVINTSGPWVDKVRNLNFTR-PVSPKMRPTKGIHLVVDAKKLPV-PQPTYFDTGKQ---DGRMVFAIPR-E-NK--TYFGTTDTDYQGDF------T---DPKV------T---QE--------------DVDYLLDVINHRYPEANITLADIEASWAGLRPLLIG--------SSLERE----PD-GLLTLSGGKITDYRKMAEGALRLIRQLLKEE----------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2RGH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -67440 for 3059 contacts (-22.0/contact) +
2D Compatibility (PS) -38987 + (NN) -11324 + (LL) 7180
1D Compatibility (HY) 2000 + (ID) 2900
Total energy: -111471.0 ( -36.44 by residue)
QMean score : 0.340
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