Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTKIFKISFLILLVVIVSSYYGESFVLADNNPIVNSENGSDNNFESGTIERNQNELYEVGDYSTPLTERVFGKDQRTVVNNILQRPYKQTVLLNMTFSNNRVYKGTGTMIGKDIVLTAAHNVYSKDDKGWAKKIDVYAGVNGQTYTIGKAFSHKFFVSKTWINNLTIV |
| 2ZGC Chain:A ((7-79)) | -------------------------------------------------------------------------------VIPHSRPYMASLQR------NGSHLCGGVLVHPKWVLTAAHCLAQRM-----AQLRLVLGLHTLDSPGLTFHIKAAIQHPRYKP----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2ZGC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -11583 for 410 contacts (-28.3/contact) +
2D Compatibility (PS) -7726 + (NN) -753 + (LL) 5664
1D Compatibility (HY) -400 + (ID) 600
Total energy: -15398.0 ( -37.56 by residue)
QMean score : 0.336
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