Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAVPDRRVSKTRAAKRRTHYSVKLAKPV-KAKDGTWKL----PHHINKFTKEY
1TWF Chain:L ((26-53))
------------------------TLKYICAECSSKLSLSRTDAVRCKDCGHR
General information:
TITO was launched using:
RESULT:
Template:
1TWF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 9684 for 97 contacts (99.8/contact) +
2D Compatibility (PS) -2417 + (NN) -1169 + (LL) 2052
1D Compatibility (HY) 1200 + (ID) 100
Total energy: 9250.0 ( 95.36 by residue)
QMean score : 0.138
(partial model without unconserved sides chains):
PDB file :
Tito_1TWF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1TWF-query.scw
PDB file :
Tito_Scwrl_1TWF.pdb
: