Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDALEITQKLISYPTITPK---ECGIFEYIKSLFP-A-FKTLECEKNGVKNLFLYRIFNPLKKHAEKEHAKEKHVKENVKPLHFCFAGHIDVVPPGN--NWQSDPFKPIIKEGFLYGRGAQDMKGGVGAFLSASLNFNPKT---PFLLSILLTSDEEGPGIFGTRLMLEKLKEKDLLPHMAIVAEPTCEKVLGDSIKIGRRGSINGKLILKG--VQGHVAYPQKCQNPIDTLASVLPLISGVHLDN-------------------------------------------------GDECFDPSKLVITNLHAGL---GANNVTPGSVEIAFNARHSLKTTQESLKEYLEKVLKDL---PYTLELESSSSPFITASHSKLTSVLQENILKTCHTT--PLLNTKGGTSDARFFSAHGIEVVEFGAIND--RIHAVDERVSLKELELLEKVFLGVLEGLSEK |
| 2POK Chain:A ((45-481)) | -HYFEVLRTLISKKSVFAQQVGLKEVANYLGEIFKRVGAEVEIDESYTAPFVMAHFKSSRP------------------DAKTLIFYNHYDTVPADGDQVWTEDPFTLSVRNGFMYGRGVDDDKGHITARLSALRKYMQHHDDLPVNISFIMEGAEESAS-TDLDKYLEKHADKLRGADLLVWEQGTKNALEQLEISGGNKGIVTFDAKVKSADVDIHSSYGGVVESAPWYLLQALQSLRAADGRILVEGLYEEVQEPNEREMALLETYGQRNPEEVSRIYGLELPLLQEERMAFLKRFFFDPALNIEGIQSGYQGQGVKTILPAEASAKLEVRLVPGLEPHDVLEKIRKQLDKNGFDKVELYYTLGEMSYRSDMSAPAILNVIELAKKFYPQGVSVLPTTAGTGPMHTVFDALEVPMVAFGLGNANSRDHGGDENVRIADYYTHIELVEELIRSYE-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2POK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -145552 for 2978 contacts (-48.9/contact) +
2D Compatibility (PS) -39448 + (NN) -14646 + (LL) 2104
1D Compatibility (HY) -9600 + (ID) 3700
Total energy: -210842.0 ( -70.80 by residue)
QMean score : 0.402
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