Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTFEPYPFERLRALFKEI-TPKKKGLDLGIGEPRFETPKFIQDALKSHTHSLNIYPKSAFEESLREAQRGFFKRRFKIELKENELVSTLGSREVLFNFPSFVLFDYPNPTIAYPNPFYQIYEGSAQFARAKSLLMPLVKENDFTPSLNEKELQEVDLVILNSPNNPTGRTLSLEELIAWVKLALKHDFILINDECYSEIYENTPPSSLLEACMLADNGAFKNVLVIHSLSKRSSAPGLRSGFIAGDSSLLEKYKAFRTYLGYTSANAIQKASEVAWLDDRHAEFFRNIYANNLKLARKIFKE-----TLIYPYSFYAYLPVKD----GENFAKTLYQNEGITTLPALYLGRNHIGADYVRLALVYDTSLLEKPLEIIEAYRENYA |
| 3H14 Chain:A ((11-382)) | --VDPFIVMDVMEAARRAEEAGRRIIHMEVGQPGTGAPRGAVEALAKSLE---------GLPALRQRIARLYGEWYGVDLDPGRVVITPGSSGGFLLAFTALFDSGDR--VGIGAPGYPSYRQILRALGLVPVDLPTAPENRLQPVPADFAGLDLAGLMVASPANPTGTMLDHAAMGALIEAAQAQGASFISDEIYHGIEYEAKAVTA--------LELTDECYVINSFSKYFSMTGWRVGWMVVPEDQVRVVERIAQNMFICAPHASQVAALAALDCDAELQANLDVYKANRKLMLERLPKAGFTRIAPPDGAFYVYADVSDLTDDSRAFAAEILEKAGVAVTPGLDFDPER-GAGTLRFSYARATADIEEGLDRLEAFMQAR- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3H14.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -127611 for 3120 contacts (-40.9/contact) +
2D Compatibility (PS) -38235 + (NN) -21402 + (LL) 1856
1D Compatibility (HY) -8800 + (ID) 3500
Total energy: -197692.0 ( -63.36 by residue)
QMean score : 0.503
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