Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQDFSSLLLKLQEYWKDQGCLVIQPYDIPAG---AGT-----FHPA-----T----------------LLRSLDK--KPWNVAYVAPSRRPTDGRYGENPNRLGSYYQFQVVI--KP-SPSNIQELYLKSLEVLGINLNEHDIRFVED--NWESPTLGAW---G-LGW-EVWLDGMEVTQFTYFQQVGGIPCS---PIPVEITYGLERLTMYVQKVENILEIEWAKKDNESVRYAQVHLESEYEFSKYHFEVASVERLLEMFKNAQAEALHCLENKLPLPAYDLVMLCSHFFNILDARKAISVAERQNYILQIRDLAKGCAVLYKEQEEEREERLKNALTKA |
| 3PCO Chain:A ((109-316)) | ---VTRTIDRIESFFGELGFTVATGPEIEDDYHNFDALNIPGHHPARADHDTFWFDTTRLLRTQTSGVQIRTMKAQQPPIRIIAPGRVYRNDYD-----QTHTPMFHQMEGLIVDTNISFTNLKGTLHDFLRNFFEE--DLQIRFRPSYFPFTEPSAEVDVMGKNGKWLEVLGCGM-VHPN-VL-RNVGIDPEVYSGFAFGM--GMERLTMLRYGVTDLRSFFENDLRFLKQFK------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PCO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -97248 for 1138 contacts (-85.5/contact) +
2D Compatibility (PS) -18102 + (NN) -9396 + (LL) 10960
1D Compatibility (HY) -6000 + (ID) 1700
Total energy: -121486.0 ( -106.75 by residue)
QMean score : 0.436
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