Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
VNNPKPCEWKSNELSRGYIADYKAFNFVDGEGVRCSLYVSGCPFHCEGCYNKAAQSFKYGKPYTKELEDDILKDIGHESVQGLTLLG--GE-PFLNTATCLSIVKRIRATYGETKDIWSWTGYTWDEMMQETADKLELLSLIDVLVDGRFEQKLFDPNLAFRGSSNQRIIDVQKSLAAGEVVLYEL
3CPR Chain:A ((33-81))
-------------------------------------------------------------DIDIAAGREVAAYLVDKGLDSLVLAGTTGESPTTTAAEKLELLKAVRE-----------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3CPR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -12640 for 229 contacts (-55.2/contact) +
2D Compatibility (PS) -4721 + (NN) -2022 + (LL) 8204
1D Compatibility (HY) -1600 + (ID) 500
Total energy: -13279.0 ( -57.99 by residue)
QMean score : 0.530
(partial model without unconserved sides chains):
PDB file :
Tito_3CPR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3CPR-query.scw
PDB file :
Tito_Scwrl_3CPR.pdb
: